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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6484120 chr11:25221012 A/C RPL7 chr8:74202502-74208024:- 0.25 6.6 1.08E-10 Box Plot
THCA rs6484120 chr11:25221012 A/C TMEM160 chr19:47549165-47551888:- -0.28 -6.49 2.19E-10 Box Plot
THCA rs6485840 chr11:48490812 C/T FOLH1B chr11:89372395-89431886:+ 0.42 6.17 1.45E-9 Box Plot
THCA rs6485857 chr11:48556511 C/A FOLH1B chr11:89372395-89431886:+ 0.43 6.32 6.11E-10 Box Plot
THCA rs6485869 chr11:48576903 G/T FOLH1B chr11:89372395-89431886:+ 0.42 6.21 1.15E-9 Box Plot
THCA rs6485879 chr11:48587984 G/T FOLH1B chr11:89372395-89431886:+ 0.43 6.29 7.02E-10 Box Plot
THCA rs6485891 chr11:48612024 T/A FOLH1B chr11:89372395-89431886:+ 0.42 6.09 2.34E-9 Box Plot
THCA rs6485965 chr11:49166730 C/T FOLH1B chr11:89372395-89431886:+ 0.37 6.44 2.89E-10 Box Plot
THCA rs6485999 chr11:49658986 G/C FOLH1B chr11:89372395-89431886:+ -0.34 -6.23 1.01E-9 Box Plot
THCA rs6486001 chr11:49659131 C/T FOLH1B chr11:89372395-89431886:+ -0.34 -6.28 7.61E-10 Box Plot
THCA rs648601 chr11:77586910 A/G INTS4L1 chr7:64601603-64694600:+ 0.6 9.81 8.34E-21 Box Plot
THCA rs6487513 chr12:25937997 G/A FAM71E1 chr19:50970042-50980010:- 0.25 5.88 7.72E-9 Box Plot
THCA rs648896 chr11:77551500 C/T INTS4L1 chr7:64601603-64694600:+ 0.62 10.12 5.99E-22 Box Plot
THCA rs6493215 chr15:30960781 A/G CHRNA7 chr15:32215641-32465219:+ -0.3 -6.92 1.43E-11 Box Plot
THCA rs6493224 chr15:30967962 C/G CHRNA7 chr15:32215641-32465219:+ 0.29 6.83 2.6E-11 Box Plot